This is an R Markdown Notebook. When you execute code within the notebook, the results appear beneath the code.

Try executing this chunk by clicking the Run button within the chunk or by placing your cursor inside it and pressing Cmd+Shift+Enter.

####Interaactive Map
tmap_mode('view')
tmap mode set to interactive viewing
tm_shape(af_2) +
  tm_fill("white",popup.vars=c("County"="cnty_nm","Tract"="NAMELSA","R/ECAPS Status"="rcp_crr","Poverty Rate (%)"="pct_por","Moran I"="lI","G-Stat"="lG", "Affordable Units"="hh_ffr_",  "p-value"="pvalue")) +
  tm_borders("grey", lwd = 0.5)+tm_shape(af_2.sub)+tm_polygons("lI", title = "Clustering", palette = "PRGn",
              style = "kmeans",
              legend.hist = T,popup.vars=c("County"="cnty_nm","Tract"="NAMELSA","R/ECAPS Status"="rcp_crr","Poverty Rate (%)"="pct_por","Moran I"="lI","G-Stat"="lG", "Affordable Units"="hh_ffr_",  "p-value"="pvalue")) +
  tm_layout(frame = F, title = "Moran's I p-values<=.05",  
            legend.hist.size = 0.5, 
            legend.outside = T)


tmap_mode("plot")
tmap mode set to plotting

Add a new chunk by clicking the Insert Chunk button on the toolbar or by pressing Cmd+Option+I.

When you save the notebook, an HTML file containing the code and output will be saved alongside it (click the Preview button or press Cmd+Shift+K to preview the HTML file).

The preview shows you a rendered HTML copy of the contents of the editor. Consequently, unlike Knit, Preview does not run any R code chunks. Instead, the output of the chunk when it was last run in the editor is displayed.

---
title: "R Notebook"
output: html_notebook
---

This is an [R Markdown](http://rmarkdown.rstudio.com) Notebook. When you execute code within the notebook, the results appear beneath the code. 

Try executing this chunk by clicking the *Run* button within the chunk or by placing your cursor inside it and pressing *Cmd+Shift+Enter*. 

```{r}
library(dplyr)
library(tidyverse)
library(cowplot)
library(ggplot2)
library(plyr)
library(reshape2)
library(tidycensus)
library(tigris)
library(sf)
library(leaflet)
library(tmap)

options(scipen=999)

###Census API Example

#census_api_key("API KEY")

#ca.tracts <- get_acs(geography = "tract", 
#              year = 2019,
#              variables = c(tpopr = "B03002_001", 
#                            nhwhite = "B03002_003", nhblk = "B03002_004", 
#                            nhasn = "B03002_006", hisp = "B03002_012",
#                            tothhs = "B11001_001"), 
#              state = "CA",
#              survey = "acs5",
#              geometry = TRUE)

#glimpse(ca.tracts)

####Housing Data Analysis###

setwd('/Users/james/Desktop/Desktop_Datasets/Center_for_Housing_Data_Project/AFFHT0006')


####Affirmatively Further Fair Housing (AFFH) Data Analysis###

###Census File
AFFH_tract_AFFHT0006_July2020<-read.csv("AFFH_tract_AFFHT0006_July2020.csv")

####Get Massachusetts Shape files using TIGRIS:
###Tigris State Shape Files (Tracts Example)
MA_Tracts<-tracts("MA", year=2020)

###CLASS: sf Dataframe
class(MA_Tracts)

####Get only Massachusetts Data from AFFH Census Tract Data
AFFH_MA_tract<-filter(AFFH_tract_AFFHT0006_July2020, state_name=="Massachusetts")

###CHANGE geoid to character to match:
AFFH_MA_tract$geoid<-as.character(AFFH_MA_tract$geoid)

class(AFFH_MA_tract)

####Combine Census Data with Shape Information:

AFFH_MA_tract_shp<- left_join(AFFH_MA_tract, MA_Tracts, by = c("geoid" = "GEOID"))

###Dataframe 
class(AFFH_MA_tract_shp)

####AFFORDABLE RENTAL HOUSING UNITS ANALYSIS

#Indicators of Interest: Poverty Rate of 25% or more: pct_poor, Current ReCAP Flag (Racially or Ethnically Concentrated Areas of Poverty): RCAP_current;
#Total Houses with Severe Cost Burden: hh_all_severe_burden; Affordable Rental Units:hh_affordable_renters. 


####Reduce Data to Geometry and Affordable Renter Units:
myvars <- names(AFFH_MA_tract_shp) %in% c("geoid","NAMELSAD", "hh_affordable_renters", "pct_poor", "rcap_current", "hh_all_severe_burden","county_name", "geometry") 
Affordable<- AFFH_MA_tract_shp[myvars]

st_geometry(st_as_sf(Affordable)) %>% plot()

Affordable_sf<-st_as_sf(Affordable)

class(Affordable_sf)

###Create Shape File

###Write to Shape File
st_write(Affordable_sf, "Affordable_sf2.shp", driver="ESRI Shapefile", delete_layer=T)
Affordable_sf2 <-st_read("Affordable_sf2.shp")


###CREATE PLOT AND WRITE TO PNG
tmap_mode("plot")
###Write to PNG
#png("Affordable.png", width = 20, height = 20, units = 'in', res = 600)

###TMAP: Median Income Using SF File

qtm(Affordable_sf2, fill="hh_ffr_", 
    format="World_wide", style="classic", 
    text.root=5, fill.title="Affordable Housing Units")+tm_layout(title="Massachusetts Affordable Housing",title.size=1.6,
          legend.title.size = 1.4,
          legend.text.size = .8,
          legend.position = c("left","bottom"),
          legend.bg.color = "white",
          legend.bg.alpha = 1)

####End Png Write
#dev.off()



####PERFORM CLUSTER/SPATIAL ASSOCIATION ANALYSIS WITH LOCAL MORANS I and G-Statistic

library(spdep)


##Remove Empty Data Frames to Allow for Conversion
af_2 <-Affordable_sf2[ ! st_is_empty( Affordable_sf2) , ]

###Convert
af_2.sp <- as_Spatial( af_2 )

# Create NB Object
lw <-poly2nb(af_2.sp)
lw <- nb2listw(lw, zero.policy=TRUE)


###Calculate local G and Add as a Column
lG <- localG(af_2$hh_ffr_,lw)
af_2$lG <- lG

####Calculate Local Moran and Add as a Column
lI <- localmoran(af_2$hh_ffr_,lw)
af_2$lI <- lI[,1]

####Calculate Local Moran pvalue and Add as a Column
###Create Local Moran P-Value
af_2$pvalue<-lI[,5]

###Create Under .05 Pvalue Dummy

af_2$pvalue_dummy[af_2$pvalue<=.05]<-1
af_2$pvalue_dummy[is.na(af_2$pvalue_dummy)]<-0 
af_2$pvalue_dummy<-as.factor(af_2$pvalue_dummy)

####Grid of Maps
tmap_mode("plot")
# 1st plot of georgia
t1 <- tm_shape(af_2) +
  tm_polygons("lG", title = "Clustering", palette = "PRGn",
              style = "kmeans",
              legend.hist = T) +
  tm_layout(frame = F, title = "G-stat of Affordable Housing",  
            legend.hist.size = 0.5, 
            legend.outside = T) 
# 2nd plot of georgia2
t2 <- tm_shape(af_2) +
  tm_polygons("lI", title = "Clustering", palette = "PRGn",
              style = "kmeans",
              legend.hist = T) +
  tm_layout(frame = F, title = "Moran's I of Affordable Housing",  
            legend.hist.size = 0.5, 
            legend.outside = T) 

library(grid)
# open a new plot page
grid.newpage()
# set up the layout
pushViewport(viewport(layout=grid.layout(1,2)))
# plot using the print command
print(t1, vp=viewport(layout.pos.col = 1, height = 10))
print(t2, vp=viewport(layout.pos.col = 2, height = 10))

###CREATE PLOT WITH ONLY LOW PVALUE TRACTS

# the tract indices below where pvalue is less than .05 
af_2$rcp_crr[af_2$rcp_crr==1]<-"RECAPS"
af_2$rcp_crr[af_2$rcp_crr!=1]<-"Not RECAPS"
af_2.sub <- af_2[af_2$pvalue_dummy==1,]


####Interaactive Map
tmap_mode('view')
tm_shape(af_2) +
  tm_fill("white",popup.vars=c("County"="cnty_nm","Tract"="NAMELSA","R/ECAPS Status"="rcp_crr","Poverty Rate (%)"="pct_por","Moran I"="lI","G-Stat"="lG", "Affordable Units"="hh_ffr_",  "p-value"="pvalue")) +
  tm_borders("grey", lwd = 0.5)+tm_shape(af_2.sub)+tm_polygons("lI", title = "Clustering", palette = "PRGn",
              style = "kmeans",
              legend.hist = T,popup.vars=c("County"="cnty_nm","Tract"="NAMELSA","R/ECAPS Status"="rcp_crr","Poverty Rate (%)"="pct_por","Moran I"="lI","G-Stat"="lG", "Affordable Units"="hh_ffr_",  "p-value"="pvalue")) +
  tm_layout(frame = F, title = "Moran's I p-values<=.05",  
            legend.hist.size = 0.5, 
            legend.outside = T)

tmap_mode("plot")



```

Add a new chunk by clicking the *Insert Chunk* button on the toolbar or by pressing *Cmd+Option+I*.

When you save the notebook, an HTML file containing the code and output will be saved alongside it (click the *Preview* button or press *Cmd+Shift+K* to preview the HTML file). 

The preview shows you a rendered HTML copy of the contents of the editor. Consequently, unlike *Knit*, *Preview* does not run any R code chunks. Instead, the output of the chunk when it was last run in the editor is displayed.

